Transcript: LINC02418:11

Basic information

LNCipedia transcript ID: LINC02418:11 
LNCipedia gene ID: LINC02418
Ensembl Gene ID: ENSG00000261650
Ensembl Transcript ID: ENST00000561864
Location (hg38): chr12:130024493-130044956
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 577 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000561864.1; RP11-474D1.4-001; OTTHUMT00000399497.2; NONHSAT031943
Alternative gene names: ENSG00000261650.1; RP11-474D1.4; OTTHUMG00000168372.2; AC055717.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.8513 non-coding 
CPAT coding probability 3.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02418:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM132D-1:3
4.0 lnc-TMEM132D-1:3
4.1 lnc-TMEM132D-1:3
5.0 lnc-TMEM132D-1:3
5.1 LINC02418:4
5.2 LINC02418:11