Transcript: LINC02418:14

Basic information

LNCipedia transcript ID: LINC02418:14 
HGNC Gene Symbol: LINC02418    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2418
Ensembl Gene ID: ENSG00000214039
Ensembl Transcript ID: ENST00000291374
Location (hg38): chr12:130033454-130042342
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3569 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000291374.7; RP11-474D1.3-002; OTTHUMT00000420964.1; NONHSAT031945; ENST00000291374.11
Alternative gene names: ENSG00000214039.3; RP11-474D1.3; OTTHUMG00000168373.2; ENSG00000214039.4; ENSG00000214039.8; LINC02418


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.5384 non-coding 
CPAT coding probability 7.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02418:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM132D-1:5
4.0 lnc-TMEM132D-1:5
4.1 lnc-TMEM132D-1:5
5.0 lnc-TMEM132D-1:5
5.1 LINC02418:7
5.2 LINC02418:14