Transcript: LINC02423:8

Basic information

LNCipedia transcript ID: LINC02423:8 
HGNC Gene Symbol: LINC02423    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2423
Ensembl Gene ID: ENSG00000256750
Ensembl Transcript ID: ENST00000542577
RefSeq ID: NR_134998
Location (hg38): chr12:118758754-118761679
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 460 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000542577; ENST00000542577.1; RP11-3L23.2-001; OTTHUMT00000401564.1; NR_134998.1
Alternative gene names: ENSG00000256750; RP11-3L23.2; ENSG00000256750.1; OTTHUMG00000168902.1; LINC02423; LOC105370014


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -405.3025 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02423:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TAOK3-3:1
3.1 lnc-TAOK3-3:1
4.0 lnc-TAOK3-3:1
4.1 lnc-TAOK3-3:1
5.0 lnc-TAOK3-3:1
5.1 LINC02423:2
5.2 LINC02423:8