Transcript: LINC02431:9

Basic information

LNCipedia transcript ID: LINC02431:9 
HGNC Gene Symbol: LINC02431    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2431
Ensembl Gene ID: ENSG00000248872
Ensembl Transcript ID: ENST00000505329
Location (hg38): chr4:171040602-171059163
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1788 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000505329; ENST00000505329.1; RP11-344G13.1-002; OTTHUMT00000362757.1; NONHSAT099194
Alternative gene names: ENSG00000248872; RP11-344G13.1; ENSG00000248872.1; OTTHUMG00000160875.1; LINC02431


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.8467 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02431:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GALNTL6-2:2
3.1 lnc-GALNTL6-2:2
4.0 lnc-GALNTL6-2:2
4.1 lnc-GALNTL6-2:2
5.0 lnc-GALNTL6-2:2
5.1 LINC02431:3
5.2 LINC02431:9