Transcript: LINC02433:10

Basic information

LNCipedia transcript ID: LINC02433:10 
HGNC Gene Symbol: LINC02433    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2433
Ensembl Gene ID: ENSG00000234111
Ensembl Transcript ID: ENST00000455598
Location (hg38): chr4:157572536-157575824
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1117 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007668; ENST00000455598; ENST00000455598.1; RP11-364P22.1-002; OTTHUMT00000365222.1; NONHSAT098973; ENST00000455598.5
Alternative gene names: XLOC_003758; linc-TMEM144-2; ENSG00000234111; RP11-364P22.1; ENSG00000234111.2; OTTHUMG00000161533.1; ENSG00000234111.6; LINC02433


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 25.8006 non-coding 
CPAT coding probability 48.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02433:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRIA2-1:3
3.1 lnc-GRIA2-1:4
4.0 lnc-GRIA2-1:4
4.1 lnc-GRIA2-1:4
5.0 lnc-GRIA2-1:4
5.1 LINC02433:5
5.2 LINC02433:10