Transcript: LINC02440:17

Basic information

LNCipedia transcript ID: LINC02440:17 
LNCipedia gene ID: LINC02440
Location (hg38): chr12:118773050-118773806
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020946; NONHSAT031050
Alternative gene names: XLOC_010215; linc-TAOK3-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.0293 non-coding 
CPAT coding probability 22.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02440:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TAOK3-4:3
3.1 lnc-TAOK3-4:3
4.0 lnc-TAOK3-4:3
4.1 lnc-TAOK3-4:3
5.0 lnc-TAOK3-4:3
5.1 LINC02440:9
5.2 LINC02440:17