Transcript: LINC02448:3

Basic information

LNCipedia transcript ID: LINC02448:3 
HGNC Gene Symbol: LINC02448    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2448
Ensembl Gene ID: ENSG00000257230
Ensembl Transcript ID: ENST00000548613
Location (hg38): chr12:59523278-59524184
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 583 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000548613.1
Alternative gene names: ENSG00000257230.1; RP11-272B17.2; LINC02448


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -193.175 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02448:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-272B17.2.1-7:1
4.1 lnc-RP11-272B17.2.1-7:1
5.0 lnc-RP11-272B17.2.1-7:1
5.1 LINC02448:2
5.2 LINC02448:3