Transcript: LINC02450:6

Basic information

LNCipedia transcript ID: LINC02450:6 
LNCipedia gene ID: LINC02450
Location (hg38): chr12:42692216-42716851
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 735 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000550177; ENST00000550177.1; RP11-25I15.3-001; OTTHUMT00000403638.1; NONHSAT027791
Alternative gene names: ENSG00000257114; RP11-25I15.3; ENSG00000257114.1; OTTHUMG00000169348.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.3951 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02450:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPHLN1-3:2
3.1 lnc-PPHLN1-3:2
4.0 lnc-PPHLN1-3:2
4.1 lnc-PPHLN1-3:2
5.0 lnc-PPHLN1-3:2
5.1 LINC02450:3
5.2 LINC02450:6