Transcript: LINC02458:12

Basic information

LNCipedia transcript ID: LINC02458:12 
LNCipedia gene ID: LINC02458
RefSeq ID: NR_038385
Location (hg38): chr12:89011126-89019692
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2509 bp
Exons: 3
Sources: Broad Institute; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00020217; NR_038385; NR_038385.1
Alternative gene names: XLOC_010147; linc-KITLG-2; LOC728084


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.5022 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02458:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DUSP6-2:1
3.1 lnc-DUSP6-2:1
4.0 lnc-DUSP6-2:1
4.1 lnc-DUSP6-2:1
5.0 lnc-DUSP6-2:1
5.1 LINC02458:5
5.2 LINC02458:12