Transcript: LINC02465:13

Basic information

LNCipedia transcript ID: LINC02465:13 
HGNC Gene Symbol: LINC02465    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2465
Ensembl Gene ID: ENSG00000249618
Ensembl Transcript ID: ENST00000507099
Location (hg38): chr4:129837361-129928716
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 532 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000507099.1; RP11-422J15.1-004; OTTHUMT00000364130.1; NONHSAT098300
Alternative gene names: ENSG00000249618.1; RP11-422J15.1; OTTHUMG00000161197.1; ENSG00000249618.5; LINC02465


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.5752 non-coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02465:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C4orf33-1:4
4.0 lnc-C4orf33-1:4
4.1 lnc-C4orf33-1:4
5.0 lnc-C4orf33-1:4
5.1 LINC02465:7
5.2 LINC02465:13