Transcript: LINC02475:12

Basic information

LNCipedia transcript ID: LINC02475:12 
LNCipedia gene ID: LINC02475
Location (hg38): chr4:44016891-44021429
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1851 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008781; NONHSAT096223
Alternative gene names: XLOC_003528; linc-GUF1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.4352 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02475:12 no no no no

Available literature

  1. Iyer (2015), The landscape of long noncoding RNAs in the human transcriptome., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GUF1-3:2
3.1 lnc-GUF1-3:2
4.0 lnc-GUF1-3:2
4.1 lnc-GUF1-3:2
5.0 lnc-GUF1-3:2
5.1 LINC02475:6
5.2 LINC02475:12