Transcript: LINC02478:16

Basic information

LNCipedia transcript ID: LINC02478:16 
LNCipedia gene ID: LINC02478
Ensembl Gene ID: ENSG00000285155
Ensembl Transcript ID: ENST00000498478
Location (hg38): chr2:160200773-160253849
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 705 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT075132; ENST00000498478.1
Alternative gene names: ENSG00000285155.1; AC092153.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.2507 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02478:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RBMS1-3:1
4.0 lnc-RBMS1-3:1
4.1 lnc-RBMS1-3:1
5.0 lnc-RBMS1-3:1
5.1 LINC02478:10
5.2 LINC02478:16