Transcript: LINC02487:3

Basic information

LNCipedia transcript ID: LINC02487:3 
HGNC Gene Symbol: LINC02487    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2487
Ensembl Gene ID: ENSG00000203688
Ensembl Transcript ID: ENST00000644320
Location (hg38): chr6:167680692-167696290
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2801 bp
Exons: 6
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000644320.1
Alternative gene names: ENSG00000203688.5; LINC02487


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.4577 non-coding 
CPAT coding probability 3.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02487:3 no no no no

Available literature

  1. Feng (2017), Transcriptome analysis reveals differentially expressed lncRNAs between oral squamous cell carcinoma and healthy oral mucosa., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC02487:3
5.1 LINC02487:3
5.2 LINC02487:3