Transcript: LINC02489:7

Basic information

LNCipedia transcript ID: LINC02489:7 
LNCipedia gene ID: LINC02489
Location (hg38): chr11:46256381-46270612
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 209 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1552:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.0138 non-coding 
CPAT coding probability 3.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02489:7 no no no no

Available literature

  1. Wang (2017), Long non-coding RNA CTA sensitizes osteosarcoma cells to doxorubicin through inhibition of autophagy., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CHRM4-1:3
4.1 lnc-CHRM4-1:3
5.0 lnc-CHRM4-1:3
5.1 LINC02489:4
5.2 LINC02489:7