Transcript: LINC02499:13

Basic information

LNCipedia transcript ID: LINC02499:13 
LNCipedia gene ID: LINC02499
Location (hg38): chr4:73531051-73534095
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2227 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008809; NONHSAT096862
Alternative gene names: XLOC_003572; linc-IL8-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.8923 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02499:13 no no no no

Available literature

  1. Zhu (2014), The long noncoding RNA expression profile of hepatocellular carcinoma identified by microarray analysis., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AFM-1:4
3.1 lnc-AFM-1:4
4.0 lnc-AFM-1:4
4.1 lnc-AFM-1:4
5.0 lnc-AFM-1:4
5.1 LINC02499:7
5.2 LINC02499:13