Transcript: LINC02504:3

Basic information

LNCipedia transcript ID: LINC02504:3 
HGNC Gene Symbol: LINC02504    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2504
Ensembl Gene ID: ENSG00000248339
Ensembl Transcript ID: ENST00000512241
Location (hg38): chr4:171289475-171298267
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4949 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007896; ENST00000512241; ENST00000512241.1; RP11-717H13.1-001; OTTHUMT00000366141.2; NONHSAT099200
Alternative gene names: XLOC_004158; linc-AADAT-5; ENSG00000248339; RP11-717H13.1; ENSG00000248339.1; OTTHUMG00000161813.2; LINC02504


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.7906 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02504:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AADAT-4:1
3.1 lnc-AADAT-4:1
4.0 lnc-AADAT-4:1
4.1 lnc-AADAT-4:1
5.0 lnc-AADAT-4:1
5.1 LINC02504:2
5.2 LINC02504:3