Transcript: LINC02512:4

Basic information

LNCipedia transcript ID: LINC02512:4 
LNCipedia gene ID: LINC02512
Location (hg38): chr4:170343088-170372311
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 430 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00007680; ENST00000509548; ENST00000509548.1; RP11-789C1.2-001; OTTHUMT00000362851.1; NONHSAT099186
Alternative gene names: XLOC_003776; linc-GALNTL6-3; ENSG00000251061; RP11-789C1.2; ENSG00000251061.1; OTTHUMG00000160896.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.4374 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02512:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLCN3-4:1
3.1 lnc-CLCN3-5:1
4.0 lnc-CLCN3-5:1
4.1 lnc-CLCN3-5:1
5.0 lnc-CLCN3-5:1
5.1 LINC02512:2
5.2 LINC02512:4