Transcript: LINC02519:23

Basic information

LNCipedia transcript ID: LINC02519:23 
LNCipedia gene ID: LINC02519
Location (hg38): chr6:169418830-169446294
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5425 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012371; NONHSAT116201
Alternative gene names: XLOC_005939; linc-THBS2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.7275 non-coding 
CPAT coding probability 9.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02519:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR27-1:1
3.1 lnc-WDR27-1:1
4.0 lnc-WDR27-1:1
4.1 lnc-WDR27-1:1
5.0 lnc-WDR27-1:1
5.1 LINC02519:6
5.2 LINC02519:23