Transcript: LINC02519:35

Basic information

LNCipedia transcript ID: LINC02519:35 
HGNC Gene Symbol: LINC02519    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2519
Ensembl Gene ID: ENSG00000226194
Ensembl Transcript ID: ENST00000440168
Location (hg38): chr6:169373681-169388385
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2282 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00011247; ENST00000440168; ENST00000440168.1; RP1-137D17.1-001; OTTHUMT00000043211.1; NONHSAT116199
Alternative gene names: XLOC_005938; linc-THBS2-2; ENSG00000226194; RP1-137D17.1; ENSG00000226194.1; OTTHUMG00000016055.1; ENSG00000226194.5; LINC02519


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.9193 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02519:35 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR27-2:3
3.1 lnc-WDR27-2:3
4.0 lnc-WDR27-2:3
4.1 lnc-WDR27-1:19
5.0 lnc-WDR27-1:19
5.1 LINC02519:18
5.2 LINC02519:35