Transcript: LINC02522:5

Basic information

LNCipedia transcript ID: LINC02522:5 
HGNC Gene Symbol: LINC02522    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2522
Ensembl Gene ID: ENSG00000231056
Ensembl Transcript ID: ENST00000431401
Location (hg38): chr6:10474500-10478502
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 256 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Hangauer et al., 2013; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000431401; ENST00000431401.1; RP1-290I10.5-001; OTTHUMT00000039810.1; NONHSAT147382; FPKM1_group_27104_transcript_1
Alternative gene names: ENSG00000231056; RP1-290I10.5; ENSG00000231056.1; OTTHUMG00000014232.1; LINC02522


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 5.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02522:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TFAP2A-3:1
3.1 lnc-TFAP2A-3:1
4.0 lnc-TFAP2A-13:2
4.1 lnc-TFAP2A-13:2
5.0 lnc-TFAP2A-13:2
5.1 LINC02522:3
5.2 LINC02522:5