Transcript: LINC02535:25

Basic information

LNCipedia transcript ID: LINC02535:25 
LNCipedia gene ID: LINC02535
Location (hg38): chr6:85387221-85390186
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2511 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00011225
Alternative gene names: XLOC_005777; linc-TBX18


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.9143 non-coding 
CPAT coding probability 2.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02535:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SNX14-1:1
3.1 lnc-SNX14-1:2
4.0 lnc-SNX14-1:2
4.1 lnc-SNX14-1:2
5.0 lnc-SNX14-1:2
5.1 LINC02535:13
5.2 LINC02535:25