Transcript: LINC02536:3

Basic information

LNCipedia transcript ID: LINC02536:3 
HGNC Gene Symbol: LINC02536    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2536
Ensembl Gene ID: ENSG00000281248
Ensembl Transcript ID: ENST00000625799
Location (hg38): chr6:127664554-127681555
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 625 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000625799.1
Alternative gene names: ENSG00000281248.1; RP11-325O24.6; LINC02536


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -31.4379 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02536:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C6orf58-5:1
4.1 lnc-C6orf58-5:1
5.0 lnc-C6orf58-5:1
5.1 LINC02536:2
5.2 LINC02536:3