Transcript: LINC02538:5

Basic information

LNCipedia transcript ID: LINC02538:5 
LNCipedia gene ID: LINC02538
RefSeq ID: NR_117091
Location (hg38): chr6:167666840-167679223
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4522 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_117091.1
Alternative gene names: LOC401286


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -18.4063 non-coding 
CPAT coding probability 46.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02538:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC02538:5
5.1 LINC02538:5
5.2 LINC02538:5