Transcript: LINC02539:11

Basic information

LNCipedia transcript ID: LINC02539:11 
LNCipedia gene ID: LINC02539
RefSeq ID: NR_121618
Location (hg38): chr6:137730170-137739037
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 791 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121618; NR_121618.1
Alternative gene names: LOC100507406


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -196.3669 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02539:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OLIG3-2:5
4.0 lnc-OLIG3-2:5
4.1 lnc-OLIG3-2:5
5.0 lnc-OLIG3-2:5
5.1 LINC02539:5
5.2 LINC02539:11