Transcript: LINC02546:13

Basic information

LNCipedia transcript ID: LINC02546:13 
LNCipedia gene ID: LINC02546
Location (hg38): chr11:29618827-29630681
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 351 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019268; NONHSAT018570
Alternative gene names: XLOC_009097; linc-FSHB-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.0371 non-coding 
CPAT coding probability 6.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02546:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FSHB-1:5
3.1 lnc-FSHB-2:5
4.0 lnc-FSHB-2:5
4.1 lnc-FSHB-2:5
5.0 lnc-FSHB-2:5
5.1 LINC02546:7
5.2 LINC02546:13