Transcript: LINC02550:15

Basic information

LNCipedia transcript ID: LINC02550:15 
LNCipedia gene ID: LINC02550
Ensembl Gene ID: ENSG00000271390
Ensembl Transcript ID: ENST00000604700
Location (hg38): chr11:111089870-111090368
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 499 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT024086; ENST00000604700.1
Alternative gene names: ENSG00000271390.1; RP11-89C3.3; AP003973.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -161.7368 non-coding 
CPAT coding probability 2.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02550:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf92-7:1
4.0 lnc-C11orf92-7:1
4.1 lnc-C11orf92-2:7
5.0 lnc-C11orf92-2:7
5.1 LINC02550:8
5.2 LINC02550:15