Transcript: LINC02552:17

Basic information

LNCipedia transcript ID: LINC02552:17 
LNCipedia gene ID: LINC02552
Location (hg38): chr11:104568355-104609334
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 790 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019745; NONHSAT023933
Alternative gene names: XLOC_009538; linc-PDGFD


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -216.1029 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02552:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CASP12-1:1
3.1 lnc-CASP12-1:1
4.0 lnc-CASP12-1:1
4.1 lnc-CASP12-1:1
5.0 lnc-CASP12-1:1
5.1 LINC02552:3
5.2 LINC02552:17