Transcript: LINC02552:20

Basic information

LNCipedia transcript ID: LINC02552:20 
LNCipedia gene ID: LINC02552
RefSeq ID: NR_120585
Location (hg38): chr11:104568489-104609302
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 624 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120585; NR_120585.1
Alternative gene names: LOC102723895


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -216.1029 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02552:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CASP12-1:7
4.0 lnc-CASP12-1:7
4.1 lnc-CASP12-1:7
5.0 lnc-CASP12-1:7
5.1 LINC02552:6
5.2 LINC02552:20