Transcript: LINC02554:11

Basic information

LNCipedia transcript ID: LINC02554:11 
LNCipedia gene ID: LINC02554
Location (hg38): chr22:27314924-27317443
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 640 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029566; NONHSAT084587
Alternative gene names: XLOC_014197; linc-HSCB-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -140.1812 non-coding 
CPAT coding probability 4.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02554:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CRYBA4-8:4
3.1 lnc-CRYBA4-8:4
4.0 lnc-CRYBA4-8:4
4.1 lnc-CRYBA4-8:4
5.0 lnc-CRYBA4-8:4
5.1 LINC02554:6
5.2 LINC02554:11