Transcript: LINC02558:4

Basic information

LNCipedia transcript ID: LINC02558:4 
LNCipedia gene ID: LINC02558
Location (hg38): chr22:31970718-31973465
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 274 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029581; NONHSAT084927
Alternative gene names: XLOC_014212; linc-SLC5A1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.0392 non-coding 
CPAT coding probability 21.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02558:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-YWHAH-2:1
3.1 lnc-YWHAH-2:1
4.0 lnc-YWHAH-2:1
4.1 lnc-YWHAH-2:1
5.0 lnc-YWHAH-2:1
5.1 LINC02558:2
5.2 LINC02558:4