Transcript: LINC02564:13

Basic information

LNCipedia transcript ID: LINC02564:13 
HGNC Gene Symbol: LINC02564    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2564
Ensembl Gene ID: ENSG00000262352
Ensembl Transcript ID: ENST00000572573
Location (hg38): chr18:11191-15928
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 920 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000572573.1; AP005530.1-001; OTTHUMT00000439669.1
Alternative gene names: ENSG00000262352.1; AP005530.1; OTTHUMG00000177910.1; LINC02564


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.55 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02564:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP14-5:4
4.0 lnc-USP14-5:4
4.1 lnc-USP14-5:4
5.0 lnc-USP14-5:4
5.1 LINC02564:5
5.2 LINC02564:13