Transcript: LINC02569:8

Basic information

LNCipedia transcript ID: LINC02569:8 
HGNC Gene Symbol: LINC02569    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2569
Ensembl Gene ID: ENSG00000235781
Ensembl Transcript ID: ENST00000415195
Location (hg38): chr6:30516266-30519217
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 851 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00011283; ENST00000415195.1; XXbac-BPG249D20.9-001; OTTHUMT00000256179.1; NONHSAT108641
Alternative gene names: XLOC_005239; linc-PRR3; ENSG00000235781.1; XXbac-BPG249D20.9; OTTHUMG00000132773.1; AL662800.1; LINC02569


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.5812 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02569:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HLA-E-1:1
3.1 lnc-HLA-E-4:1
4.0 lnc-HLA-E-4:1
4.1 lnc-HLA-E-4:1
5.0 lnc-HLA-E-4:1
5.1 LINC02569:2
5.2 LINC02569:8