Transcript: LINC02582:12

Basic information

LNCipedia transcript ID: LINC02582:12 
HGNC Gene Symbol: LINC02582    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2582
Ensembl Gene ID: ENSG00000261780
Ensembl Transcript ID: ENST00000577634
Location (hg38): chr18:73332272-73333842
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 779 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577634.1; CTD-2354A18.1-002; OTTHUMT00000444219.1; NONHSAT059837
Alternative gene names: ENSG00000261780.2; CTD-2354A18.1; OTTHUMG00000176206.2; AC105243.1; LINC02582


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -347.3949 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02582:12 no no no no

Available literature

  1. Xue (2017), A long non-coding RNA expression signature to predict survival of patients with colon adenocarcinoma., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIMM21-4:3
4.0 lnc-TIMM21-4:3
4.1 lnc-TIMM21-4:3
5.0 lnc-TIMM21-4:3
5.1 LINC02582:5
5.2 LINC02582:12