Transcript: LINC02586:6

Basic information

LNCipedia transcript ID: LINC02586:6 
HGNC Gene Symbol: LINC02586    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2586
Ensembl Gene ID: ENSG00000224965
Ensembl Transcript ID: ENST00000455967
Location (hg38): chr1:110208834-110209987
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 748 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000601; ENST00000455967.1; KCNC4-AS1-001; OTTHUMT00000098110.1
Alternative gene names: XLOC_000956; linc-ALX3-1; ENSG00000224965.1; KCNC4-AS1; OTTHUMG00000040850.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.7078 non-coding 
CPAT coding probability 2.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02586:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ALX3-1:1
3.1 lnc-ALX3-3:1
4.0 KCNC4-AS1:1
4.1 KCNC4-AS1:1
5.0 KCNC4-AS1:1
5.1 LINC02586:2
5.2 LINC02586:6