Transcript: LINC02587:9

Basic information

LNCipedia transcript ID: LINC02587:9 
HGNC Gene Symbol: LINC02587    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2587
Ensembl Gene ID: ENSG00000229108
Ensembl Transcript ID: ENST00000442176
Location (hg38): chr7:15688378-15695491
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 697 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00012958; ENST00000442176.1; AC005550.4-001; OTTHUMT00000326053.1; NONHSAT119281
Alternative gene names: XLOC_005991; linc-LOC100129335-2; ENSG00000229108.1; AC005550.4; OTTHUMG00000152388.1; MEOX2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -251.7456 non-coding 
CPAT coding probability 4.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02587:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC006035.2-2:1
3.1 lnc-AC006035.2-2:1
4.0 MEOX2-AS1:1
4.1 MEOX2-AS1:1
5.0 MEOX2-AS1:1
5.1 LINC02587:2
5.2 LINC02587:9