Transcript: LINC02593:31

Basic information

LNCipedia transcript ID: LINC02593:31 
LNCipedia gene ID: LINC02593
Location (hg38): chr1:916874-923833
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 6960 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1497:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -36.0662 non-coding 
CPAT coding probability 92.85% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02593:31 no no no no

Available literature

  1. Li (2018), Identification of a five-lncRNA signature for predicting the risk of tumor recurrence in breast cancer patients., Int. J. Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NOC2L-1:10
4.1 lnc-NOC2L-1:10
5.0 lnc-NOC2L-1:10
5.1 LINC02593:10
5.2 LINC02593:31