Transcript: LINC02593:40

Basic information

LNCipedia transcript ID: LINC02593:40 
LNCipedia gene ID: LINC02593
Location (hg38): chr1:917573-919437
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1865 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT000206
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.7419 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02593:40 no no no no

Available literature

  1. Li (2018), Identification of a five-lncRNA signature for predicting the risk of tumor recurrence in breast cancer patients., Int. J. Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NOC2L-1:7
4.0 lnc-NOC2L-1:7
4.1 lnc-NOC2L-1:7
5.0 lnc-NOC2L-1:7
5.1 LINC02593:19
5.2 LINC02593:40