Transcript: LINC2194:11

Basic information

LNCipedia transcript ID: LINC2194:11 
LNCipedia gene ID: LINC2194
Location (hg38): chr16:24251938-24252851
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 339 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024353; NONHSAT141155
Alternative gene names: XLOC_011675; linc-CACNG3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -280.4404 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC2194:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CACNG3-1:1
3.1 lnc-CACNG3-1:5
4.0 lnc-CACNG3-1:5
4.1 lnc-CACNG3-1:5
5.0 lnc-CACNG3-1:5
5.1 LINC2194:6
5.2 LINC2194:11