Transcript: LINC2194:7

Basic information

LNCipedia transcript ID: LINC2194:7 
LNCipedia gene ID: LINC2194
Location (hg38): chr16:24236083-24238046
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 220 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024351; NONHSAT141151
Alternative gene names: XLOC_011673; linc-CACNG3-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.5187 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC2194:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRKCB-1:1
3.1 lnc-CACNG3-1:1
4.0 lnc-CACNG3-1:1
4.1 lnc-CACNG3-1:1
5.0 lnc-CACNG3-1:1
5.1 LINC2194:2
5.2 LINC2194:7