Transcript: LINGO1-AS2:3

Basic information

LNCipedia transcript ID: LINGO1-AS2:3 
LNCipedia gene ID: LINGO1-AS2
Location (hg38): chr15:77660052-77668073
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 662 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000512414
Alternative gene names: ENSG00000248960;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.9604 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINGO1-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HMG20A-2:1
3.1 lnc-HMG20A-4:1
4.0 LINGO1-AS2:3
4.1 LINGO1-AS2:3
5.0 LINGO1-AS2:3
5.1 LINGO1-AS2:3
5.2 LINGO1-AS2:3