Transcript: LIPE-AS1:19

Basic information

LNCipedia transcript ID: LIPE-AS1:19 
LNCipedia gene ID: LIPE-AS1
Location (hg38): chr19:42397159-42485594
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 565 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000213904.4|ENST00000597203.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.9895 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIPE-AS1:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LIPE-AS1:19
5.0 LIPE-AS1:19
5.1 LIPE-AS1:19
5.2 LIPE-AS1:19