Transcript: LIPE-AS1:20

Basic information

LNCipedia transcript ID: LIPE-AS1:20 
LNCipedia gene ID: LIPE-AS1
Location (hg38): chr19:42397159-42652355
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1463 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000213904.4|ENST00000594624.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.4232 non-coding 
CPAT coding probability 4.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIPE-AS1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LIPE-AS1:20
5.0 LIPE-AS1:20
5.1 LIPE-AS1:20
5.2 LIPE-AS1:20