Transcript: LIPE-AS1:26

Basic information

LNCipedia transcript ID: LIPE-AS1:26 
LNCipedia gene ID: LIPE-AS1
Location (hg38): chr19:42424281-42485226
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 954 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000213904.4|ENST00000593740.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -138.6208 non-coding 
CPAT coding probability 26.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIPE-AS1:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LIPE-AS1:26
5.0 LIPE-AS1:26
5.1 LIPE-AS1:26
5.2 LIPE-AS1:26