Transcript: LLPH-DT:13

Basic information

LNCipedia transcript ID: LLPH-DT:13 
LNCipedia gene ID: LLPH-DT
Location (hg38): chr12:66130879-66134449
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3571 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1563:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 62.1194 coding 
CPAT coding probability 3.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LLPH-DT:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LLPH-AS1:3
4.1 LLPH-AS1:3
5.0 LLPH-AS1:3
5.1 LLPH-DT:7
5.2 LLPH-DT:13