Transcript: LMCD1-AS1:10

Basic information

LNCipedia transcript ID: LMCD1-AS1:10 
LNCipedia gene ID: LMCD1-AS1
Location (hg38): chr3:7954639-8501662
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 996 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227110.2|ENST00000446281.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -92.6295 non-coding 
CPAT coding probability 8.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LMCD1-AS1:10 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LMCD1-AS1:10
5.0 LMCD1-AS1:10
5.1 LMCD1-AS1:10
5.2 LMCD1-AS1:10