Transcript: LMCD1-AS1:3

Basic information

LNCipedia transcript ID: LMCD1-AS1:3 
LNCipedia gene ID: LMCD1-AS1
RefSeq ID: NR_033378
Location (hg38): chr3:8221147-8501658
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2147 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT087708; NR_033378; NR_033378.1
Alternative gene names: ; LMCD1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.2483 non-coding 
CPAT coding probability 14.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LMCD1-AS1:3 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf32-2:8
4.0 LMCD1-AS1:3
4.1 LMCD1-AS1:3
5.0 LMCD1-AS1:3
5.1 LMCD1-AS1:3
5.2 LMCD1-AS1:3