Transcript: LMNB1-DT:10

Basic information

LNCipedia transcript ID: LMNB1-DT:10 
LNCipedia gene ID: LMNB1-DT
Location (hg38): chr5:126751973-126776918
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1160 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251072.2|HBMT00001167786.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -204.4991 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LMNB1-DT:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MARCH3-1:4
5.0 lnc-MARCH3-1:4
5.1 LMNB1-DT:4
5.2 LMNB1-DT:10