Transcript: LMNB1-DT:13

Basic information

LNCipedia transcript ID: LMNB1-DT:13 
HGNC Gene Symbol: LMNB1-DT    
HGNC Full Gene Name: LMNB1 divergent transcript
Ensembl Gene ID: ENSG00000251072
Ensembl Transcript ID: ENST00000509185
RefSeq ID: NR_134485
Location (hg38): chr5:126751963-126776486
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 914 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000509185.2; RP11-434D11.4-001; OTTHUMT00000371432.2; NONHSAT103598; NR_134485.1
Alternative gene names: ENSG00000251072.2; RP11-434D11.4; OTTHUMG00000163029.3; AC137794.1; LOC102723557; LMNB1-DT


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -204.4991 non-coding 
CPAT coding probability 5.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LMNB1-DT:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MARCH3-1:1
4.0 lnc-MARCH3-1:1
4.1 lnc-MARCH3-1:1
5.0 lnc-MARCH3-1:1
5.1 LMNB1-DT:7
5.2 LMNB1-DT:13