Transcript: LNX1-AS2:2

Basic information

LNCipedia transcript ID: LNX1-AS2:2 
LNCipedia gene ID: LNX1-AS2
Location (hg38): chr4:53592956-53605381
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1962 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT096402; NR_046827
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.0124 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LNX1-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GSX2-3:3
4.0 LNX1-AS2:2
4.1 LNX1-AS2:2
5.0 LNX1-AS2:2
5.1 LNX1-AS2:2
5.2 LNX1-AS2:2