Transcript: LRP1-AS:3

Basic information

LNCipedia transcript ID: LRP1-AS:3 
LNCipedia gene ID: LRP1-AS
RefSeq ID: NR_131939
Location (hg38): chr12:57146490-57147619
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 415 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131939.1
Alternative gene names: LRP1-AS


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -182.4248 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LRP1-AS:3 yes no no no

Available literature

  1. Yamanaka (2015), Antisense RNA controls LRP1 Sense transcript expression through interaction with a chromatin-associated protein, HMGB2., Cell Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LRP1-AS:3
5.1 LRP1-AS:3
5.2 LRP1-AS:3